KEGG   Cryptosporidium parvum: cgd6_80
Entry
cgd6_80           CDS       T00168                                 
Name
(RefSeq) RPD3/HD1 histone deacetylase
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cpv  Cryptosporidium parvum
Pathway
cpv03082  ATP-dependent chromatin remodeling
cpv03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cpv00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    cgd6_80
   03083 Polycomb repressive complex
    cgd6_80
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cpv03036]
    cgd6_80
Enzymes [BR:cpv01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     cgd6_80
Chromosome and associated proteins [BR:cpv03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     cgd6_80
   HDAC complexes
    Sin3A-HDAC complex
     cgd6_80
    BRAF-HDAC complex
     cgd6_80
    REST complex
     cgd6_80
    SHIP complex
     cgd6_80
    MiDAC complex
     cgd6_80
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     cgd6_80
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    cgd6_80
  Chromatin remodeling factors
   NuRD complex
    cgd6_80
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 3375652
NCBI-ProteinID: XP_625348
ApiDB_CryptoDB: cgd6_80
UniProt: Q5CPK1
Position
6:complement(24270..25652)
AA seq 460 aa
ILLVSHLNNIVVISLKMAKRVSYFYDGDIGSYYYGPGHPMKPQRIRMAHNLILSYDLYKH
MEIYKPHKSPQSELVYFHEEDYINFLSSINPDNSKDFGLQLKRFNLGETTDCPVFDGLFE
FQQICAGGSIDGAYKLNNEQSDICINWSGGLHHAKRSEASGFCYINDIVLGILELLKYHA
RVMYIDIDVHHGDGVEEAFYLSHRVLTVSFHKFGEFFPGTGDITDIGVAQGKYYSVNVPL
NDGIDDDSFLSLFKPIISKCIEVYRPGAIVLQCGADSVRGDRLGRFNLSIKGHAECVEFC
KKFNIPLLILGGGGYTIRNVARTWAYETATILDRTDLISDNIPLNDYYDYFAPDFKLHIP
PLNLPNMNSPEHLEKIKAKVIDNLRYLEHAPGVEFAYVPSDFFDREASNLQKQEDEEREE
ELSSWQGGGRAAGSTESQGNHNEKPKSSRKLQKEHASEFY
NT seq 1383 nt   +upstreamnt  +downstreamnt
attttattagtcagccatttaaataacattgtagtaatatctttaaagatggcaaaaaga
gtttcatatttctatgatggagacataggaagttattattatggcccaggccatccaatg
aagcctcaaagaattagaatggctcacaacttaatactttcatacgacctatataagcat
atggaaatttacaagcctcacaaatcgccacagagtgagttagtttattttcatgaggaa
gactatatcaatttcctttcaagtattaaccctgataactctaaagattttgggctacaa
cttaaaagatttaatctaggagagacaactgattgccctgtatttgatggtctttttgaa
ttccagcaaatatgtgctggtggtagtatcgatggtgcttataaattaaataatgaacaa
tctgacatttgtattaattggagcggtggacttcaccatgcaaaaagatctgaggctagt
ggattctgctacattaacgatatagttttagggattttggagttacttaaatatcatgct
agagttatgtatattgatatagatgtacaccatggagacggtgtagaggaggctttctac
ctttctcatagggtattaacagtttccttccataagtttggagagtttttcccaggaact
ggtgatatcacagatattggagttgctcaaggtaaatactatagtgttaatgtaccatta
aatgatggtattgatgacgactctttcttatcattatttaaacctattattagtaaatgt
attgaagtatataggccgggtgcaatagttcttcagtgtggagctgattctgtaagaggc
gatagacttggtcgttttaatctatcaattaaagggcatgcggaatgcgtcgaattttgc
aagaaatttaatattcccctacttatacttgggggtggaggatatacaataagaaatgtt
gctagaacttgggcatatgaaactgctacaattctagatagaactgatttgatttcagat
aatatacctttgaatgactactatgattactttgcaccagactttaaactccatattcct
ccacttaatttgcctaatatgaactcaccagaacatctggaaaaaattaaagcgaaagtt
attgataatttgagatatttggaacacgctccaggagtagaatttgcttatgttccatca
gatttctttgatagggaggcctcaaaccttcaaaaacaagaagatgaggagcgagaagag
gagctttcatcttggcaaggaggaggaagagctgcaggtagcactgaatcccaaggtaat
cacaatgaaaagcctaaatcatctagaaaactacaaaaagaacatgcttctgaattttat
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   APIDB_CRYPTODB (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (34)   

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